Quick navigation:        Home   |    Site Map   ||    References   |    Biography   ||    Copyright   |    Other copyright   |    Contact us   |   
Protein structure
 

Re: [ccp4bb] Sulfate ion on 2-fold axis - Garib?

 

Basic tutorials:
 
 

CCP4bb navigation

CCP4bb <-- 2008 <-- January 2008 <-- 11 January 2008
Previous message:
Subject: Re: Sulfate ion on 2-fold axis - Garib?
From: Garib Murshudov garib {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2008-01-11
Next message:
Subject: Re: Multiple Signature Motifs in a single protein
From: Artem Evdokimov artem {- at -} XTALS {- dot -} ORG
Date: 2008-01-11


Subject: Re: Sulfate ion on 2-fold axis - Garib?
From: Garib Murshudov garib {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2008-01-11

sorry for repeat. Link I gave in the previous mail should be:
www.ysbl.york.ac.uk/YSBLPrograms/index.jsp

Garib


On 11 Jan 2008, at 19:58, Jie Liu wrote:

> I've played around for a while, also read the manual
> and googled the internet, but just couldn't find a way
> to set up the restraints to the symmetry related atoms
> in Refmac5. Could anyone please kindly advice me
> how to do that?
>
> Thank you!!!
>
> Jie
>
> Eleanor Dodson wrote:
>
>> It needs Garib to answer this!
>> Eleanor
>>
>> Charlie Bond wrote:
>>> Eleanor Dodson wrote:
>>>
>>>> It should be more or less equivalent, but better I think to put
>>>> 1S at
>>>> 0.5 occ and 2O at occ = 1
>>>>
>>>> At least in REFMAC the restraints to the symmetry atoms should
>>>> be set up
>>>>
>>>
>>> But if you do that, some of the bond angles will be unrestrained,
>>> won't
>>> they?: O1-S-O2 will be OK, but O1-S-O1' and O2-S-O2' will not. Or is
>>> refmac cleverer than I think?
>>>
>>> Cheers,
>>> Charlie
>>>
>

CCP4bb navigation

CCP4bb <-- 2008 <-- January 2008 <-- 11 January 2008
Previous message:
Subject: Re: Sulfate ion on 2-fold axis - Garib?
From: Garib Murshudov garib {- at -} YSBL {- dot -} YORK {- dot -} AC {- dot -} UK
Date: 2008-01-11
Next message:
Subject: Re: Multiple Signature Motifs in a single protein
From: Artem Evdokimov artem {- at -} XTALS {- dot -} ORG
Date: 2008-01-11



ProteinCrystallography.org: Copyright 2006-2007 by Quid United Ltd