[ccp4bb] problems about installation of mosflm701

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CCP4bb <-- 2008 <-- March 2008 <-- 27 March 2008

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From: U Sam us_x {- at -} HOTMAIL {- dot -} COM
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Subject: problems about installation of mosflm701
From: Lu Yongzhi luyongzhi99 {- at -} 163 {- dot -} COM
Date: 2008-03-27

----- Original Message -----
From: Lu Yongzhi
To: ccp4 bb
Sent: Wednesday, March 26, 2008 7:41 PM
Subject: problems about installation of mosflm701

Hi,

My OS is fedoral core 5. I have installed ccp4-6.0.2 which include the mosflm 6, but I want to install mosflm7.0.1. I downloaded the program, but I can't install it properly. I source the file 'intel', the echo is (I have changed the 'setenv' to 'export'):

bash: export: `-lccp4f -lccp4c -lxdl_view': not a valid identifier
MOSROOT has been set to

bash: export: `/index': not a valid identifier
bash: export: `/src/dps/util': not a valid identifier
bash: export: `/jpg': not a valid identifier
bash: intel: line 65: syntax error: unexpected end of file

could anyone can help me.

the lines in the 'intel' file are:

#!/bin/csh -fv
#
# setup shell script for the development copies of Mosflm for different
# platforms.
#
# Common stuff first
#
export CCP4_LIB_FILES '-lccp4f -lccp4c -lxdl_view'
set mosroot = ${cwd:h}
export MOSROOT $mosroot
echo MOSROOT has been set to $MOSROOT
set moshome = ${cwd}
export MOSHOME $moshome
echo $MOSHOME
export AR_FLAGS vru
export DPS ${MOSHOME}
export IND ${MOSHOME}/index
export UTIL ${MOSHOME}/src/dps/util
export JPG ${MOSHOME}/jpg
# intel compiler specifics - change this to your local installation
if ( -e /opt/intel/compiler70/ia32/bin/ifcvars.csh )then
source /opt/intel/compiler70/ia32/bin/ifcvars.csh
else
echo You must either edit the file called "intel" to source the correct
echo ifcvars.csh file or install both the Intel C++ and FORTRAN compilers
exit
endif
if ( -e /opt/intel/compiler70/ia32/ifc_fudge.o )then
export FUDGE /opt/intel/compiler70/ia32/ifc_fudge.o
export NOFUDGE ""
else
export FUDGE ""
export NOFUDGE -i_dynamic
endif
export DEBUG ""
export F77 "ifc ${DEBUG}"
export FCOMP "${F77}"
export FC "${F77}"
export CC "icc ${DEBUG}"
export FLINK "${F77} ${DEBUG}"
export FFLAGS "-O -align -w90 -cm"
export CFLAGS "-O0 -O -DPROTOTYPE -DIFC -c -w"
# if no "fudge.o" vide infra export LFLAGS "-Vaxlib -i_dynamic"
export LFLAGS "-Vaxlib $NOFUDGE"
#
# (2) Mosflm directory
#
export MOSFLAGS "-O3 -align -w90 -cm"
# export MOSFLAGS "-O3 -align -w90 -cm -prof_gen" this line for profiling only
# export MOSFLAGS "-O3 -align -w90 -cm -prof_use" & change $F77 etc to include "-ipo" flag

export MCFLAGS "-O0"
export MOSLIBS "-L${CCP4_LIB} ${CCP4_LIB_FILES} -lncurses -L/usr/X11R6/lib -lXt -lSM -lICE -lX11 -ldl -lpthread -lm ${FUDGE}"
#
# (3) CBF directories
#
export CBFCFLAGS "-O -DPROTOTYPE -DIFC"
# DPS
export VERBOSE "v"
export UTILFLAGS "-O -DPROTOTYPE -DIFC -c -w"
export EXTRAFLAGS "-I${UTIL} "
export STDCFLAGS ""

exit

CCP4bb navigation

CCP4bb <-- 2008 <-- March 2008 <-- 27 March 2008

Previous message:
Subject: Angle between NCS-axis and Crystallographic axis
From: U Sam us_x {- at -} HOTMAIL {- dot -} COM
Date: 2008-03-26

Next message:
Subject: Incubator for Crystallization plates
From: Orly Dym orly {- dot -} dym {- at -} WEIZMANN {- dot -} AC {- dot -} IL
Date: 2008-03-27