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Re: [ccp4bb] Model ensemble for x-ray crystallography

 

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CCP4bb <-- 2008 <-- March 2008 <-- 28 March 2008
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Subject: Re: Model ensemble for x-ray crystallography
From: "Das, Debanu" debanu {- at -} SLAC {- dot -} STANFORD {- dot -} EDU
Date: 2008-03-28
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Subject: Re: program to draw 2D image of a peptide
From: "Kumar, Abhinav" abhinavk {- at -} SLAC {- dot -} STANFORD {- dot -} EDU
Date: 2008-03-28


Subject: Re: Model ensemble for x-ray crystallography
From: Pavel Afonine pafonine {- at -} LBL {- dot -} GOV
Date: 2008-03-28

Have a look at this:

Acta Cryst. (2007). D63, 597-610
Interpretation of ensembles created by multiple iterative rebuilding of
macromolecular models
T. C. Terwilliger, R. W. Grosse-Kunstleve, P. V. Afonine, P. D. Adams,
N. W. Moriarty, P. Zwart, R. J. Read, D. Turk and L.-W. Hung

Pavel.


On 3/28/2008 8:57 AM, Bryan W. Lepore wrote:
>> At 10:13 AM 3/28/2008, Lucas Bleicher wrote :
>>> Some time ago I've heard about the idea of proposing an ensemble of
>>> models (as in NMR), instead of a single model for x-ray
>>> crystallography structures. If I remember correctly, this idea has
>>> been published somewhere. Can anyone tell me what article is that?
>
> jmb 301 1237-1256, 2000 analyzes the disorder in calmodulin that
> considers such a treatment along with other models of disorder.
>
> http://www.ncbi.nlm.nih.gov/pubmed/10966818
>
> -bryan

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CCP4bb <-- 2008 <-- March 2008 <-- 28 March 2008
Previous message:
Subject: Re: Model ensemble for x-ray crystallography
From: "Das, Debanu" debanu {- at -} SLAC {- dot -} STANFORD {- dot -} EDU
Date: 2008-03-28
Next message:
Subject: Re: program to draw 2D image of a peptide
From: "Kumar, Abhinav" abhinavk {- at -} SLAC {- dot -} STANFORD {- dot -} EDU
Date: 2008-03-28



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