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Re: [ccp4bb] problem with Coot and ccp4mg
 

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CCP4bb <-- 2008 <-- March 2008 <-- 28 March 2008
Previous message:
Subject: Re: program to draw 2D image of a peptide
From: Sandra Dias sd277 {- at -} CORNELL {- dot -} EDU
Date: 2008-03-28 		Next message:
Subject: Re: 3D structure based alignment
From: Gerrit Langer gerrit {- at -} EMBL-HAMBURG {- dot -} DE
Date: 2008-03-28


Subject: Re: problem with Coot and ccp4mg
From: Kay Diederichs kay {- dot -} diederichs {- at -} UNI-KONSTANZ {- dot -} DE
Date: 2008-03-28
Uma Katre schrieb:
> Dear all,
> I recently installed CCP4 suite on a DELL workstation running Red Hat
> Enterprise Linux 5. CCP4 seems to be working fine, however, Coot and
> ccp4mg fail to open. This is what I get when I try to run Coot:
>
> current_exe_dir is /usr/local/ccp4/ccp4-6.0.2/Coot-0.3.3/bin
> COOT_PREFIX is /usr/local/ccp4/ccp4-6.0.2/Coot-0.3.3
> /usr/local/ccp4/ccp4-6.0.2/Coot-0.3.3/bin/coot-real: error while loading
> shared libraries: libXmu.so.6: cannot open shared object file: No such
> file or directory
> coot-exe: "/usr/local/ccp4/ccp4-6.0.2/Coot-0.3.3/bin/coot-real"
> core: #f
> No core file found. No debugging
>
> I get something similar when I try to run ccp4mg, it also complains
> about libXmu.so.6.
> libXmu.so.6 is in /usr/lib64/. I tried to create symbolic links at
> various places, like /usr/lib/ and lib/ of coot and ccp4mg, still could
> not get rid of the problem. Is it the problem because of 64-bit system?
> How can I overcome it?
>

yes, it's a 64bit thing.

just install the 32bit RPM which has /usr/lib/libXmu.so.6 (coot was
compiled for 32bit) ... and before doing so, make sure you remove those
symlinks you created!

check out http://strucbio.biologie.uni-konstanz.de/ccp4wiki/index.php/CentOS

HTH,

Kay

--
Kay Diederichs http://strucbio.biologie.uni-konstanz.de
email: Kay.Diederichs@uni-konstanz.de Tel +49 7531 88 4049 Fax 3183
Fachbereich Biologie, Universitaet Konstanz, Box M647, D-78457 Konstanz

CCP4bb navigation

CCP4bb <-- 2008 <-- March 2008 <-- 28 March 2008
Previous message:
Subject: Re: program to draw 2D image of a peptide
From: Sandra Dias sd277 {- at -} CORNELL {- dot -} EDU
Date: 2008-03-28 		Next message:
Subject: Re: 3D structure based alignment
From: Gerrit Langer gerrit {- at -} EMBL-HAMBURG {- dot -} DE
Date: 2008-03-28


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