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Re: [ccp4bb] environ.def / default.def
 

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CCP4bb <-- 2008 <-- May 2008 <-- 16 May 2008
Previous message:
Subject: Re: No permission to CCP4I TOP dir
From: William Scott wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU
Date: 2008-05-16 		Next message:
Subject: Re: My New Address
From: William Scott wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU
Date: 2008-05-16


Subject: Re: environ.def / default.def
From: William Scott wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU
Date: 2008-05-16
On Fri, May 16, 2008 1:06 pm, Eike Schulz wrote:
> Hello everybody,
>
>
> ----------------------------------------------------------------
> setenv CCP4_MASTER /usr/local/software/ccp4
> setenv CCP4 $CCP4_MASTER/ccp4-6.0.2
>


For bash, zsh, etc, you need to start with

export CCP4_MASTER=/usr/local/software/ccp4
export CCP4=$CCP4_MASTER/ccp4-6.0.2

setenv is specific to (t)csh.
export is specific to the sh-like shells.



> ---------------------------------------------------------------
>
>
> ... and the .bashrc contains following entries:
>
>
> ---------------------------------------------------------------
> PATH="$PATH:/usr/local/software/ccp4/ccp4-6.0.2/bin/"
> PATH="$PATH:/usr/local/software/ccp4/ccp4-6.0.2/include/"
> /usr/local/software/ccp4/ccp4-6.0.2/include/ccp4.setup-bash
> ---------------------------------------------------------------


I think that last line would need to be

source /usr/local/software/ccp4/ccp4-6.0.2/include/ccp4.setup-bash

and you shouldn't need this line:

PATH="$PATH:/usr/local/software/ccp4/ccp4-6.0.2/include/"

and you should get rid of the trailing slash on this line:

> PATH="$PATH:/usr/local/software/ccp4/ccp4-6.0.2/bin/"

to make it

> PATH="$PATH:/usr/local/software/ccp4/ccp4-6.0.2/bin"

but if ccp4.setup-bash works, you shouldn't need to explicitly set any
PATH, including the one you missed (for ccp4i).





William G. Scott

Contact info:
http://chemistry.ucsc.edu/~wgscott/

CCP4bb navigation

CCP4bb <-- 2008 <-- May 2008 <-- 16 May 2008
Previous message:
Subject: Re: No permission to CCP4I TOP dir
From: William Scott wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU
Date: 2008-05-16 		Next message:
Subject: Re: My New Address
From: William Scott wgscott {- at -} CHEMISTRY {- dot -} UCSC {- dot -} EDU
Date: 2008-05-16


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