Quick navigation:        Home   |    Site Map   ||    References   |    Biography   ||    Copyright   |    Other copyright   |    Contact us   |   
Protein structure
 

Re: [ccp4bb] Alternate space groups for MR in Beast
 

Basic tutorials: 		 
 

CCP4bb navigation

CCP4bb <-- 2007 <-- May 2007 <-- 07 May 2007
Previous message:
Subject: Re: Alternate space groups for MR in Beast
From: "Das, Debanu" debanu {- at -} SLAC {- dot -} STANFORD {- dot -} EDU
Date: 2007-05-07 		Next message:
Subject: Re: Problem on creating a new monomer
From: Kendall Nettles knettles {- at -} SCRIPPS {- dot -} EDU
Date: 2007-05-07


Subject: Re: Alternate space groups for MR in Beast
From: Roger Rowlett RRowlett {- at -} MAIL {- dot -} COLGATE {- dot -} EDU
Date: 2007-05-07
Ed,

I would highly recommend Phaser to do what you want. Phaser can be
configured to search all possible related space groups, or the ones you
designate. Open-EPMR can also do automated related space-group searching
as well.

Cheers,

___________________________________________
Roger S. Rowlett
Professor
Department of Chemistry
Colgate University
13 Oak Drive
Hamilton, NY 13346

tel: (315)-228-7245
ofc: (315)-228-7395
fax: (315)-228-7935
email: rrowlett@mail.colgate.edu


-----Original Message-----
From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of
Edward A. Berry
Sent: Monday, May 07, 2007 2:32 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] Alternate space groups for MR in Beast


Dear All,
I'm doing molecular replacement with beast, using
the ccp4i gui.
Space group is P41 or P43 based on syst. absences.
Input mtz file is reduced in P41, but I want
to try the translation search with both. So,

Does beast automatically try both?
Is there a parameter I can enter to set p43 on second run?
Do I need to change space group of input file to test p43?

Thanks,
Ed

CCP4bb navigation

CCP4bb <-- 2007 <-- May 2007 <-- 07 May 2007
Previous message:
Subject: Re: Alternate space groups for MR in Beast
From: "Das, Debanu" debanu {- at -} SLAC {- dot -} STANFORD {- dot -} EDU
Date: 2007-05-07 		Next message:
Subject: Re: Problem on creating a new monomer
From: Kendall Nettles knettles {- at -} SCRIPPS {- dot -} EDU
Date: 2007-05-07


ProteinCrystallography.org: Copyright 2006-2007 by Quid United Ltd