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Supported X-ray Image Plate and CCD Detector specifications for Denzo/XDisplayF
- Protein crystallography

Main steps:

   - Protein purification
   - Crystallisation

Special:

   - Programs for crystallography
       - ADSC-software
       - HKL package
       - HKL2000 package
         - XDisplayF
           - Supported formats
       - HKL2MAP
       - Pocket
   - X-ray detectors

Basic tutorials:

   - Chemistry
   - Protein
   - Peptide
   - Amino Acids

Xtal community:

   - CCP4BB

List of all supported X-ray scanner formats for Denzo/XdispalyF(xdisp)

For correct Denzo/XdispalyF (xdisp) operation it is vitally important to use proper detector format. One option is to get a full list off all currently supported X-ray detectors by typing in command string xdisp. See below for output.

To run XDisplayF with specified modifier use:
xdisp MODIFIER image_name
To run Denzo with for specified image format use:
FORMAT modifier

XDISP output

Programs Denzo and Scalepack developed by Zbyszek Otwinowski
Copyright 1985-94 by Zbyszek Otwinowski
Copyright 1994-97 by UTexas Southwestern Medical Center at Dallas
Program XDISPLAYF developed by Wladek Minor
Copyright 1991-95 by Purdue Research Foundation
Copyright 1996-97 by University of Virginia Patent Foundation

HKL data processing system Version 1.97.9

Program is licensed to ##### at ###############

Detector format not correctly specified
Your definition:
is not on the following lists

Formats defined for MAR scanners:

'mar345 180mm 100 - 345mm scanner 180mm scan 100u size
'mar345 180mm 150 - 345mm scanner 180mm scan 150u size
'mar345 240mm 100 - 345mm scanner 240mm scan 100u size
'mar345 240mm 150 - 345mm scanner 240mm scan 150u size
'mar345 300mm 100 - 345mm scanner 300mm scan 100u size
'mar345 300mm 150 - 345mm scanner 300mm scan 150u size
'mar345 345mm 100 - 345mm scanner 345mm scan 100u size
'mar345 345mm 150 - 345mm scanner 345mm scan 150u size
'mar red' - red EMBL scanner in Hamburg (MAR prototype)
'mar 18cm' - 300mm or 180mm scanner, 180mm scan
'mar 30cm' - 300mm scanner, 300mm scan
'mar 18cm lmb' - MRC-LMB prototype, 1187pixel format
'mar 30cm compressed' - 300mm scanner, MRC-LMB compressed format

Formats defined for MAC Science scanners:

'dip 100' - DIP-100
'dip 2000' - DIP-2000 12-bit A/D converter
'dip 2000b' - DIP-2000 16-bit A/D converter
'dip 2030' - DIP-2030 12-bit A/D converter
'dip 2030b' - DIP-2030 16-bit A/D converter
'dip 3000' - DIP-3000 cylindrical Weissenberg
'dip 320' - DIP-320 Weissenberg
'dip 420' - DIP-420 off-line

Formats defined for Rigaku Raxis scanners:

'raxis4 50' - RAXIS-IV 50 micron raster scan
'raxis4 100' - RAXIS-IV 100 micron raster scan
'raxis4 200' - RAXIS-IV 200 micron raster scan
'raxis4 old' - RAXIS-IV (prototype) 100 micron raster scan
'raxis' - RAXIS-IIc 105 micron scan
'raxis 210' - RAXIS-IIc 210 micron scan

Formats defined for Rigaku Raxis scanners:

'raxishtc 50' - RAXIS-IV 50 micron raster scan
'raxishtc 100' - RAXIS-IV 100 micron raster scan
'raxishtc 200' - RAXIS-IV 200 micron raster scan
'raxis' - RAXIS-IIc 105 micron scan
'raxis 210' - RAXIS-IIc 210 micron scan

Formats defined for Nonius CCD Detectors:

'ccd nonius' - KappaCCD detector unbinned
'ccd nonius dz' - KappaCCD detector unbinned dezingering-on
'ccd nonius binned' - KappaCCD detector binned
'ccd nonius binned dz' - KappaCCD detector binned dezingering-on

Formats defined for ESRF CCD Detectors:

'ccd esrf 1242' - ESRF CCD detector - beam line 19 at ESRF - raw data
'ccd esrf fit2d transformed' - ESRF CCD detector - beam line 19 at ESRF - format transformed to 1200x1200 pixels

Formats defined for other CCD Detectors:

'ccd chess 55mm' - 55mm [original] 1k CCD detector at CHESS
'ccd chess 80mm' - 2k CCD detector 2048x2048 image - CHESS
'ccd chess 80mm binned' - 2k CCD detector in binned mode - CHESS
'ccd adsc' - ADSC CCD detector - CHESS
'fuji nl' - Photon Factory fuji BA-100 scanner NL format
'fuji 10bit' - fuji 10bit scanner 100micron
'fuji ba100' - Photon Factory fuji BA-100 scanner SL format
'pf beam line 18b center' - Photon Factory beamline 18b center
'pf beam line 18b top' - Photon Factory beamline 18b top
'pf beam line 18b bottom' - Photon Factory beamline 18b bottom
'pf beam line 18b beam' - Photon Factory beamline 18b beam region
'pf beam line 18b' - Photon Factory beamline 18b whole image

Detector DescriptionModifier for XdisplayF Ver 1.96 and higher and for Denzo Format

Off-line scanners at Synchrotron Sources

fuji 10 bit scanner 100 micron rasterfuji 10bit
Film scanner (Purdue type) 25 micron scanfilm 25
Film scanner (Purdue type) 50 micron scanfilm 50
Film scanner (Purdue type) 100 micron scanfilm 100
Film scanner (Uppsala type) 50 micron scanfilm lars
Film scanner (Weizmann type) 50 micron scanfilm is

Bruker detectors

CCD Bruker quad detector - IMCA beam lineccd bruker quad
CCD Bruker quad detector (binned mode) - IMCA beam lineccd bruker quad binned
CCD Bruker single detector (older)ccd bruker
CCD SMART-6000 Bruker detector in binned modeccd smart6000 binned

APS CCD detectors

CCD APS-1 detector at SBCccd aps1
CCD APS-1 detector at SBC in binned modeccd aps1 binned
CCD SBC-2 detector at SBCccd sbc2
CCD SBC-2 detector at SBC in binned modeccd sbc2 binned

Nonius detectors

Nonius KappaCCD detectorccd nonius
Nonius KappaCCD detector dezingeringonccd nonius dz
Nonius KappaCCD detector binnedccd nonius binned
Nonius KappaCCD detector binned dezingering-onccd nonius binned dz
Nonius KappaCCD-2000 detectorccd noniusb
Nonius KappaCCD-2000 detector dezingering-onccd noniusb dz
Nonius KappaCCD-2000 detector binnedccd noniusb binned
Nonius KappaCCD-2000 detector binned dezingering-onccd noniusb binned dz

MAC Science detectors

MAC Science DIP-100dip 100
MAC Science DIP-2000 12-bit A/D converterdip 2020
MAC Science DIP-2000 16-bit A/D converterdip 2020b
MAC Science DIP-2030 12-bit A/D converterdip 2030
MAC Science DIP-2030 16-bit A/D converterdip 2030b
MAC Science DIP-2040 16-bit A/D converterdip 2040b
MAC Science DIP-3000 cylindrical Weissenbergdip 3000
MAC Science DIP-320 Weissenberg scannerdip 320
MAC Science DIP-320 Weissenberg scanner 16bitdip 320b
MAC Science DIP-3200 Weissenberg scannerdip 3200
MAC Science DIP-3200-2 Weissenberg scanner (long)dip 3200l
MAC Science DIP-420 off-line scannerdip 420
MAC Science DIP scanner for neutrons 0.2mm pixeldip nf
MAC Science DIP scanner for neutrons 0.4mm pixeldip nc

ADSC detectors
ADSC Quantum4 CCD detector (raw data)ccd adsc quantum4
ADSC Quantum4 CCD detector (raw data) dezingering-onccd adsc quantum4 dz
ADSC Quantum4 CCD detector (raw data) binnedccd adsc quantum4 binned
ADSC Quantum4 CCD detector (raw data) binned dezingering-onccd adsc quantum4 binned dz
ADSC Quantum4 CCD detector (corrected data)ccd adsc unsupported-q4
ADSC Quantum4 CCD detector (corrected data) binnedccd adsc unsupported-q4 binned
ADSC Quantum210 CCD detector (corrected data)ccd adsc unsupported-q210
ADSC Quantum210 CCD detector (corrected data) binnedccd adsc unsupported-q210 binned
ADSC Quantum315 CCD detector (corrected data)ccd adsc unsupported-q315
ADSC Quantum315 CCD detector (corrected data) binnedccd adsc unsupported-q315 binned
ADSC Quantum 1 CCD detector - CHESSccd adsc
ADSC Quantum 1 CCD detectorccd adsc

MAR Research detectors

red EMBL scanner in Hamburgmar_corr
MAR scanner @ LBL -LMB prototype 1187 pixel formatmar lbl
MAR scanner in MRC-LMB compressed 'pck' modemar compressed
MAR scanner in small plate modemar 18cm
MAR scanner in large plate modemar 30cm
MAR 345mm scanner 180mm scan 100 micron sizemar345 180mm 100
MAR 345mm scanner 180mm scan 100 micron size compressedmar345 180mm 100 marpck
MAR 345mm scanner 180mm scan 150 micron sizemar345 180mm 150
MAR 345mm scanner 180mm scan 150 micron size compressedmar345 180mm 150 marpck
MAR 345mm scanner 240mm scan 100 micron sizemar345 240mm 100
MAR 345mm scanner 240mm scan 100 micron size compressedmar345 240mm 100 marpck
MAR 345mm scanner 240mm scan 150 micron sizemar345 240mm 150
MAR 345mm scanner 240mm scan 150 micron size compressedmar345 240mm 150 marpck
MAR 345mm scanner 300mm scan 100 micron sizemar345 300mm 100
MAR 345mm scanner 300mm scan 100 micron size compressedmar345 300mm 100 marpck
MAR 345mm scanner 300mm scan 150 micron sizemar345 300mm 150
MAR 345mm scanner 300mm scan 150 micron size compressedmar345 300mm 150 marpck
MAR 345mm scanner 345mm scan 100 micron sizemar345 345mm 100
MAR 345mm scanner 345mm scan 100 micron size compressedmar345 345mm 100 marpck
MAR 345mm scanner 345mm scan 150 micron sizemar345 345mm 150
MAR 345mm scanner 345mm scan 150 micron size compressedmar345 345mm 150 marpck
MAR CCD detector 165 mmccd unsupported-m165
MAR CCD detector 130mmccd unsupported-mar

Rigaku Raxis (RigakuMSC) detectors

RAXIS-IIc Rigaku scanner 105 micron raster scanraxis
RAXIS-IIc Rigaku scanner 210 micron raster scanraxis 210
RAXIS-IIc Rigaku scanner 105 micron scan (Japanese version)raxis2n
RAXIS-IIc Rigaku scanner 210 micron scan (Japanese version)raxis2n 210
RAXIS-IV Rigaku (prototype) 100 micron raster scanraxis4 old
RAXIS-IV Rigaku scanner 50 micron raster scanraxis4 50
RAXIS-IV Rigaku scanner 100 micron raster scanraxis4 100
RAXIS-IV Rigaku scanner 200 micron raster scanraxis4 200

STOE detector

STOE scannerstoe

Prototype CCD Detectors at Synchrotron Facilities

CCD (Brandeis University) at BNL X12Cccd brandeis
CCD Brandeis 2k CCD single chip detector at X12Cccd brandeis-2k
CCD Brandeis 2x2ccd unsupported-b4
CCD 2k detector CHESS 2048x2048 imageccd chess 80mm
CCD 2k detector CHESS 1024x1024 (binned mode)ccd chess 80mm binned
CCD (ESRF) detector BL19 at ESRF-raw dataccd bl19
CCD (ESRF) detector BL19 at ESRF>1200x1200 pxlccd esrf fit2d transformed
CCD (ESRF) detector BL19 at ESRF>1200x1200 pxlccd esrf fit2d transformed wrong distance
CCD (ESRF) detector 1024*1024ccd esrf 1024
CCD (ESRF) detector 1152x1242ccd esrf 1242
CCD detector EEV chip 576 pixelsccd eev 576
CCD detector EEV chip 576 pixels double image modeccd eev 576 double
CCD detector EEV chip 620 pixelsccd eev 620
CCD detector EEV chip 621 pixelsccd eev 621
CCD detector EEV chip 625 pixelsccd eev 625
CCD detector EEV chip 625 pixels binnedccd eev 625 binned
CCD detector EEV chip 1152 pixelsccd eev
CCD 1k 55mm [original Sol Gruner] detector at CHESSccd chess 55mm

Photon Factory detectors

Photon Factory - Amemiya drum scannerpf beam line 14a
Photon factory fuji BA-100 scanner NL formatfuji nl
Photon factory fuji BA-100 scanner NL format (Weisenberg)weis nl
Photon factory fuji BA-100 scanner SL format (Weisenberg)weis sl
Photon Factory beam line 18b whole imagepf beam line 18b
Photon Factory beam line 18b centerpf beam line 18b center
Photon Factory beam line 18b beam regionpf beam line 18b beam
Photon Factory beam line 18b bottompf beam line 18b bottom
Photon Factory beam line 18b toppf beam line 18b top
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